BGS Hosted Metadata
Community antimicrobial resistance genes and concentrations of polycyclic aromatic hydrocarbons and metals in NE England soils (2016)
The dataset collates the relative concentration of nearly 300 antimicrobial resistance (AMR) genes, and concentrations of polycyclic aromatic hydrocarbons (PAH) and potentially toxic elements (PTE; e.g., “metals”) found in soils across northeastern England during a sampling expedition in June 2016 by researchers at Newcastle University. Top soils (15cm depths; “A” horizon) were obtained from 24 rural and urban locations around Newcastle upon Tyne, representing a spectrum of landscape conditions relative to anticipated PTE contamination. There are three files related to different types of data collected: antimicrobial resistance genes, metal concentrations and PAH concentrations. The high-throughput analysis of nearly 300 AMR genes include many resistance traits representing major antibiotic classes: aminoglycosides, beta lactams, FCA (fluoroquinolone, quinolone, chloramphenicol, florfenicol and amphenicol resistance genes), MLSB (macrolide, lincosamide, streptogramin B), tetracycline, vancomycin, sulphonamide, and efflux pumps. PAH data represent the US Environmental Protection Agency priority polycyclic aromatic hydrocarbons as one of the measures of pollution impact. The other measure of impact is based on levels of twelve PTE represented by “total” and “two bio-available” concentrations, based on three extraction methods. Elements included aluminium, arsenic, beryllium, cadmium, chromium, copper, iron, lead, mercury, nickel, phosphorus, and zinc. Full details about this dataset can be found at https://doi.org/10.5285/35b49db6-8522-4c6b-a779-820268292603
Simple
- Date (Publication)
- 2019-07-17
- Citation identifier
- https://catalogue.ceh.ac.uk/id/35b49db6-8522-4c6b-a779-820268292603
- Citation identifier
- doi: / 10.5285/35b49db6-8522-4c6b-a779-820268292603
- Other citation details
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Knapp, C.W., Graham, D.W., Cooke, M., McCann, C., Zhu, Y.-., Su, J. (2019). Community antimicrobial resistance genes and concentrations of polycyclic aromatic hydrocarbons and metals in NE England soils (2016). NERC Environmental Information Data Centre 10.5285/35b49db6-8522-4c6b-a779-820268292603
- Point of contact
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Organisation name Individual name Electronic mail address Role University of Strathclyde Knapp, C.W. Author Newcastle University Graham, D.W. Author Newcastle University Cooke, M.
Author Newcastle University McCann, C.
Author Institute of Urban Environment, Chinese Academy of Sciences
Zhu, Y.-.
Author Institute of Urban Environment, Chinese Academy of Sciences
Su, J.
Author University of Strathclyde Knapp, C. Point of contact NERC EDS Environmental Information Data Centre Custodian NERC Environmental Information Data Centre Publisher
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GEMET - INSPIRE themes, version 1.0
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Soil
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- Access constraints
- Other restrictions
- Other constraints
- no limitations
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- Other restrictions
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© Natural Environment Research Council
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© University of Strathclyde
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- Other restrictions
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© Newcastle University
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- Other restrictions
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© Chinese Academy of Sciences
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- Other restrictions
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If you reuse this data, you should cite: Knapp, C.W., Graham, D.W., Cooke, M., McCann, C., Zhu, Y.-., Su, J. (2019). Community antimicrobial resistance genes and concentrations of polycyclic aromatic hydrocarbons and metals in NE England soils (2016). NERC Environmental Information Data Centre https://doi.org/10.5285/35b49db6-8522-4c6b-a779-820268292603
- Spatial representation type
- Text, table
- Distance
- 100 urn:ogc:def:uom:EPSG::9001
- Language
- English
- Character set
- UTF8
- Topic category
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- Biota
- Begin date
- 2016-06-01
- End date
- 2016-06-30
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- Unique resource identifier
- WGS 84
- Distribution format
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Name Version Comma-separated values (CSV)
- Distributor contact
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Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre
Distributor
- OnLine resource
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Protocol Linkage Name https://data-package.ceh.ac.uk/data/35b49db6-8522-4c6b-a779-820268292603 Download the data
- OnLine resource
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Protocol Linkage Name https://data-package.ceh.ac.uk/sd/35b49db6-8522-4c6b-a779-820268292603.zip Supporting information
- Hierarchy level
- Dataset
- Other
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dataset
Conformance result
- Title
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Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services
- Date (Publication)
- 2010-12-08
- Statement
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The dataset was developed by researchers at Newcastle University in close collaboration with Institute of Urban Environment – Chinese Academy of Sciences and submitted by University of Strathclyde. The data were compiled under the auspices of the NERC “AMR in the Real World” funded project (NE/N019776/1). Details of their methodologies are provided in the accompanying supplemental information.
Metadata
- File identifier
- 35b49db6-8522-4c6b-a779-820268292603 XML
- Metadata language
- English
- Character set
- 8859 Part 1
- Hierarchy level
- Dataset
- Hierarchy level name
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dataset
- Date stamp
- 2025-03-21T15:34:53
- Metadata standard name
- UK GEMINI
- Metadata standard version
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2.3
- Metadata author
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Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre Point of contact
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