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Sequencing data from Signy Island, Leonie Island and Bird Island soil fungi communities, 2011

Soil fungi communities from three Antarctic islands were characterised using DNA sequencing. Between October and November 2011, soil samples were collected from Bird Island, Signy Island and Leonie Island in the sub-Antarctic, low maritime and high maritime Antarctic respectively. Soil was collected under populations of Colobanthus quitensis (Kunth) Bartl. and Deschampsia antarctica Desv., the only two native vascular plant species that occur in Antarctica. Total DNA was extracted from the soils and fungal specific primers used to amplify the ribosomal ITS region for subsequent 454 pyrosequencing. Sequences are deposited in the NCBI Sequence Read Archive (study accession SRP068654).





Funding was provided by the NERC grants NE/H014098/1, NE/H014772/1 and NE/H01408X/1.

Simple

Date (Creation)
2017-03-08
Date (Revision)
2017-03-08
Date (Publication)
2017-03-08
Date (released)
2017-03-08
Edition

1

Unique resource identifier
70d2e5b6-3d1b-4851-ae55-4c5518ee5e29
Codespace

uuid

Unique resource identifier
GB/NERC/BAS/PDC/00927
Codespace

https://data.bas.ac.uk/

Unique resource identifier
NE/H014098/1
Codespace

award

Unique resource identifier
NE/H014772/1
Codespace

award

Unique resource identifier
NE/H01408X/1
Codespace

award

Other citation details

Please cite this item as: None

Credit

No credit.

Status
Completed
Point of contact
Organisation name Individual name Electronic mail address Role

North Wyke Research Station

Dungait, Jennifer

Author
British Antarctic Survey

Newsham, Kevin

Author

University of Manchester

Robinson, Clare

Author

North Wyke Research Station

Bol, Roland

Author

University of Manchester

Cox, Filipa

Author
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Point of contact
Maintenance and update frequency
As needed
Maintenance note
Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Cryosphere > Frozen Ground > Active Layer
  • EARTH SCIENCE > Cryosphere > Frozen Ground > Permafrost
  • EARTH SCIENCE > Land Surface > Soils > Microflora
  • EARTH SCIENCE > Land Surface > Soils > Permafrost
  • EARTH SCIENCE > Biosphere > Fungi Taxonomy
Theme
  • DNA

  • Fungi

  • Sequencing

  • Soil

Place
  • Signy Island, Leonie Island and Bird Island Antarctica

GEMET - INSPIRE themes, version 1.0

  • Meteorological geographical features
  • Land cover
  • Habitats and biotopes
Access constraints
Other restrictions
Other constraints
no limitations to public access
Access constraints
Other restrictions
Other constraints
no limitations
Use constraints
License
Other constraints
Open Government Licence v3.0
Use constraints
Other restrictions
Other constraints

This data is governed by the NERC Data Policy: https://www.ukri.org/who-we-are/nerc/our-policies-and-standards/nerc-data-policy/

Use constraints
Other restrictions
Other constraints

This data is governed by the NERC data policy and supplied under Open Government Licence v.3

Use constraints
Other restrictions
Other constraints

Some restrictions may apply - see details on NCBI website.

Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Spatial representation type
Text, table
Language
English
Character set
UTF8
Topic category
  • Biota
  • Geoscientific information
N
S
E
W
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Begin date
2011-10-01
End date
2011-11-30
Supplemental Information

It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.

Title

European Petroleum Survey Group (EPSG) Geodetic Parameter Registry

Date (Publication)
2008-11-12
Cited responsible party
Organisation name Individual name Electronic mail address Role

European Petroleum Survey Group

EPSGadministrator@iogp.org

Publisher
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version

6.18.3

Distributor

Distributor contact
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Distributor
Units of distribution

bytes

Transfer size
1
OnLine resource
Protocol Linkage Name

WWW:LINK-1.0-http--link

https://www.ncbi.nlm.nih.gov/sra/?term=SRP068654

Get Data

Hierarchy level
Dataset
Statement

Methodology:

See the referenced publication for further information.

Metadata

File identifier
70d2e5b6-3d1b-4851-ae55-4c5518ee5e29 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Hierarchy level name

dataset

Date stamp
2017-03-08
Metadata standard name

ISO 19115 Geographic Information - Metadata

Metadata standard version

ISO 19115:2003(E)

Metadata author
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

polardatacentre@bas.ac.uk

Point of contact
 
 

Overviews

Spatial extent

thumbnail

Keywords

DNA Fungi Sequencing Soil
GEMET - INSPIRE themes, version 1.0

Habitats and biotopes Land cover Meteorological geographical features
Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE > Biosphere > Fungi Taxonomy EARTH SCIENCE > Cryosphere > Frozen Ground > Active Layer EARTH SCIENCE > Cryosphere > Frozen Ground > Permafrost EARTH SCIENCE > Land Surface > Soils > Microflora EARTH SCIENCE > Land Surface > Soils > Permafrost


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