BGS Hosted Metadata
Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019
The data provided here are model iteration objects and rasters needed to run the multi-scale modelling process and predict how the host condition affects probability of Hendra virus shedding. The dataset contains predictions of three proxies for host conditions (including food shortage, rehabilitation admissions and formation of a new roost) across eastern Australia in 2008-2019. The Roost Species Distribution Model (SDM) has predictions of roost suitability. These are monthly, spatially explicit predictions of particular conditions or probability of roost occupations. The model objects are iterations of models that were initially trained on data held in figshare ( https://figshare.com/s/ddb5a1584609b20f6596). These data objects are linked with code provided at https://github.com/hanlab-ecol/BatOneHealth to be able to run the models and analyses. This includes comparisons of virus predictions of seven different multiscale model structures to observed Hendra virus shedding in field surveys. The purpose of this study was to determine if quantifying and incorporating host condition into epidemiological models improves predictions of virus shedding in space and time. The data objects relate to the 1,000 iterations run of this process to better able to account for uncertainty. Full details about this dataset can be found at https://doi.org/10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
Simple
- Date (Publication)
- 2025-03-03
- Citation identifier
- https://catalogue.ceh.ac.uk/id/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Citation identifier
- doi: / 10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Other citation details
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Kramer, A.M., Faust, C.L., Castellanos, A.A., Fischhoff, I.R., Peel, A.J., Eby, P., Ruiz-Aravena, M., Borremans, B., Plowright, R.K., Han, B.A. (2025). Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019. NERC EDS Environmental Information Data Centre 10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Point of contact
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Organisation name Individual name Electronic mail address Role University of South Florida Kramer, A.M. Author University of Glasgow Faust, C.L. Author University of Glasgow Faust, C.L. Point of contact Cary Institute Castellanos, A.A. Author Cary Institute Fischhoff, I.R. Author University of Sydney Peel, A.J. Author University of New South Wales Eby, P. Author Cornell University Ruiz-Aravena, M. Author Wildlife Health Ecology Research Organization
Borremans, B. Author Cornell University Plowright, R.K. Author Cary Institute Han, B.A. Author University of Glasgow Owner NERC EDS Environmental Information Data Centre Publisher NERC EDS Environmental Information Data Centre Custodian
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GEMET - INSPIRE themes, version 1.0
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Species Distribution
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- Access constraints
- Other restrictions
- Other constraints
- no limitations
- Use constraints
- Other restrictions
- Use constraints
- Other restrictions
- Other constraints
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If you reuse this data, you should cite: Kramer, A.M., Faust, C.L., Castellanos, A.A., Fischhoff, I.R., Peel, A.J., Eby, P., Ruiz-Aravena, M., Borremans, B., Plowright, R.K., Han, B.A. (2025). Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Spatial representation type
- Grid
- Distance
- 5000 urn:ogc:def:uom:EPSG::9001
- Language
- English
- Character set
- UTF8
- Topic category
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- Biota
- Health
- Begin date
- 2008-01-01
- End date
- 2019-12-31
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- Reference system identifier
- GDA2020/SA Lambert
- Distribution format
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Name Version TIFF
rdata
- Distributor contact
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Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre
Distributor
- OnLine resource
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Protocol Linkage Name https://catalogue.ceh.ac.uk/datastore/eidchub/93bb37c6-ef86-4386-945d-c1a3d1e2683c Download the data
- OnLine resource
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Protocol Linkage Name https://data-package.ceh.ac.uk/sd/93bb37c6-ef86-4386-945d-c1a3d1e2683c.zip Supporting information
- Hierarchy level
- Dataset
- Other
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dataset
Conformance result
- Title
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Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services
- Date (Publication)
- 2010-12-08
- Statement
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Each of the data objects (1,000 per component model) is related to training a component model using data sampled with replacement. These data objects are trained on field observations of host conditions (food shortage, rehabilitation admissions or formation of new roost) or locations and occupation of roost by black flying foxes (key Hendra virus host). Model parameters, predictor variables, and training are all described in the supplementary information. Each iteration only differs slightly in the training and testing data due to this resampling with replacement, allowing for slight variation in prediction among the runs.
Metadata
- File identifier
- 93bb37c6-ef86-4386-945d-c1a3d1e2683c XML
- Metadata language
- English
- Character set
- 8859 Part 1
- Hierarchy level
- Dataset
- Hierarchy level name
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dataset
- Date stamp
- 2025-03-21T10:51:00
- Metadata standard name
- UK GEMINI
- Metadata standard version
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2.3
- Metadata author
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Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre Point of contact
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