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UAV imagery of wildlife colonies, South Georgia and the South Sandwich Islands, 2019-2020

During the 2019/20 austral summer, an unoccupied aerial vehicle (UAV; drone) was used to collect imagery of breeding populations of seals, penguins and albatross. Two extensive southern elephant seal breeding sites were surveyed with complete counts made around the peak pupping date. A total of nine islands historically recorded as breeding sites for wandering albatross were surveyed. Populations of Adelie and chinstrap penguin colonies at the South Sandwich Islands, an extensive king penguin colony on South Georgia and a macaroni penguin colony, also on South Georgia, were also included in the surveys.





The South Georgia aspects of this work were funded by grants to the British Antarctic Survey (BAS) from the Government of South Georgia and the South Sandwich Islands and UK Foreign Commonwealth and Development Office. The South Sandwich Islands expedition was funded by the John Ellerman Foundation and donations from passengers on Quark Expeditions' ships.

Simple

Date (Creation)
2021-04-15
Date (Revision)
2021-04-15
Date (Publication)
2021-04-15
Date (released)
2021-04-15
Edition

1.0

Unique resource identifier
https://doi.org/10.5285/cc083575-2cb8-4477-be76-8d81d44cfdc5
Codespace

doi

Unique resource identifier
GB/NERC/BAS/PDC/01483
Codespace

https://data.bas.ac.uk/

Other citation details

Please cite this item as: Dickens, J., Hart, T., Collins, M., & Hollyman, P. (2021). UAV imagery of wildlife colonies, South Georgia and the South Sandwich Islands, 2019-2020 (Version 1.0) [Data set]. NERC EDS UK Polar Data Centre. https://doi.org/10.5285/cc083575-2cb8-4477-be76-8d81d44cfdc5

Credit

No credit.

Status
Completed
Point of contact
Organisation name Individual name Electronic mail address Role
British Antarctic Survey

Dickens, John

Author

University of Oxford

Hart, Tom Author
British Antarctic Survey Collins, Martin Author
British Antarctic Survey Hollyman, Philip Author
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Point of contact
Maintenance and update frequency
As needed
Maintenance note
Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Birds
  • EARTH SCIENCE > Oceans > Marine Environment Monitoring
Theme
  • Southern elephant seal

  • penguin

  • remote sensing

  • unoccupied aerial vehicle

  • wandering albatross

Place
  • Bay of Isles South Georgia Island

  • Hound Bay South Georgia Island

  • St Andrews Bay South Georgia Island

  • Rookery Point South Georgia Island

  • Beach Point, Thul Island South Sandwich Islands

GEMET - INSPIRE themes, version 1.0

  • Oceanographic geographical features
Access constraints
Other restrictions
Other constraints
no limitations to public access
Access constraints
Other restrictions
Other constraints
no limitations
Use constraints
License
Other constraints
Open Government Licence v3.0
Use constraints
Other restrictions
Other constraints

Data released under Open Government Licence V3.0:





Dickens, J., Hart, T., Collins, M., & Hollyman, P. (2021). UAV imagery of wildlife colonies, South Georgia and the South Sandwich Islands, 2019-2020 (Version 1.0). NERC EDS UK Polar Data Centre. https://doi.org/10.5285/CC083575-2CB8-4477-BE76-8D81D44CFDC5

Unique resource identifier
url
Codespace

url

Association Type
dependency
Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Unique resource identifier
url
Codespace

url

Association Type
dependency
Spatial representation type
Text, table
Language
English
Character set
UTF8
Topic category
  • Biota
  • Environment
N
S
E
W
thumbnail




Begin date
2019-10-02
End date
2020-01-09

Vertical extent

Minimum value
40.0
Maximum value
120.0

Vertical CS

No information provided.

Vertical datum

No information provided.
Supplemental Information

It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.

Title

European Petroleum Survey Group (EPSG) Geodetic Parameter Registry

Date (Publication)
2008-11-12
Cited responsible party
Organisation name Individual name Electronic mail address Role

European Petroleum Survey Group

EPSGadministrator@iogp.org

Publisher
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version

6.18.3

Distributor

Distributor contact
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Distributor
Distributor format
Name Version
image/tiff
Units of distribution

bytes

Transfer size
40426379674
OnLine resource
Protocol Linkage Name

WWW:LINK-1.0-http--link

https://ramadda.data.bas.ac.uk/repository/entry/show?entryid=cc083575-2cb8-4477-be76-8d81d44cfdc5

Get Data

Hierarchy level
Dataset
Statement

Methodology:

The study took place at five locations on South Georgia and 1 location at the South Sandwich Islands between October 2019 and January 2020. At South Georgia southern elephant seal populations were surveyed along the coastline within King Edward Cove on the Thatcher Peninsula, and at Hound Bay and St Andrews Bay on the Barff Peninsula. Nine islands within the Bay of Isles were surveyed with a focus on the wandering albatross population. Additionally, a king penguin colony at St Andrews Bay and a macaroni penguin colony at Rookery Bay were surveyed. As part of an expedition to the South Sandwich Islands a survey of a mixed Adelie and chinstrap penguin colony at Beach Point on Thule Island was carried out from a yacht.





All surveys utilised a commercially available quadcopter, DJI Mavic 2 Pro (DJI Inc., Shenzhen, China), equipped with the original 20MP RGB Hasselblad L1D-20c camera. The UAV was remotely piloted using the DJI GO 4 app (DJI Inc., Shenzhen, China; version 4.3) run on an iPhone 8 (Apple, Cupertino, CA) or DJI smart controller (DJI Inc., Shenzhen, China). Being small and light the UAV was portable and did not require specialised launching or recovery equipment. The majority of flights involved terrestrial take-off and landing, apart from those to survey the Bay of Isles, Hound Bay and Beach Point on Thule Island, which were piloted from a vessel at sea within close proximity of the study site. Initial plans of using software to compile predetermined survey flight paths at South Georgia were dismissed, primarily due to limited internet access which would have been required to download the maps necessary for offline use when in the field, but also due to the imprecise location of targets within maps. Breeding colonies may expand, contract or shift location making it impractical to rely on predefined survey paths. The UAV was therefore controlled manually with the pilot configuring the camera settings to achieve consistent sets of imagery and estimating the level of overlap between images with attempts made to achieve at least 70 percent forward and lateral overlap. The majority of the surveys were flown at a horizontal speed of 5 m/s with the UAV set to capture a photograph every 2 seconds. An observer was present during flights to assist the pilot by keeping visual contact of the UAV and making observations of potential disturbance to wildlife. Briefings were given to observers by the pilot to ensure they were aware of emergency procedures, should an issue arise. The UAV pilots underwent training prior to the study and gained a Remote Pilot Qualification-Small (RPQ-S) and a Civil Aviation Authority Permission for Commercial Operation (CAA PfCO).





Flights were only conducted under suitable flying conditions and were made in accordance with the Air Navigation (Overseas Territories) Ordinance, following regulations set out by the Government of South Georgia and the South Sandwich Islands (GSGSSI) under Regulated Activity Permits RAP 2019/020, RAP 2019/024 and RAP 2019/050.





Images were recovered from the UAV after each flight and saved on external storage media, in duplicate with one copy as a backup, for further processing. The images were initially organised and processed using Adobe Photoshop Lightroom Classic (Adobe Systems Inc, San Jose, California, USA) with keywords assigned to each unique survey, including additional metadata about the flights. Exposure corrections were made where necessary and altered image files were exported as georeferenced JPEGs for further processing. Agisoft Metashape (Agisoft 2020, Version 1.6.2, https://www.agisoft.com) was used to align and stitch the images from each unique survey to form orthomosaic images. These were exported as georeferenced TIFF files for use in mapping software, and as lower resolution JPEG files for counts. The resolution of the orthoimages ranged from 1.2 cm/pixel in surveys co...(2)

Data collection:

UAV - DJI Mavic 2 Pro



UAV flight software - DJI GO4 app



Adobe Lightroom CC 10.0 was used for image management



Agisoft Metashape (Agisoft 2020, Version 1.6.2, https://www.agisoft.com) was used for image processing



Counts of southern elephant seals from the aerial imagery were all made by a single observer using opensource software, DotDotGoose - Ersts, P. J. (2019). DotDotGoose (version 1.5.1). American Museum of Natural History, Center for Biodiversity and Conservation. Available from https://biodiversityinformatics.amnh.org/open_source/dotdotgoose. Accessed on 2020-11-11.

Data quality:

Georeferenced UAV imagery is accurate to within 5 m of actual ground position. UAVs used in the study were calibrated to the manufacturing standards. Imagery may have altered slightly during stitching with minimal distortion due to changes in ground elevation and movement of animals between overlapping captured images.





Resolution: Variable - spatial resolution between 1.2 and 3.2 cm per pixel for much of the imagery.

Metadata

File identifier
cc083575-2cb8-4477-be76-8d81d44cfdc5 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Hierarchy level name

dataset

Date stamp
2021-04-15
Metadata standard name

ISO 19115 Geographic Information - Metadata

Metadata standard version

ISO 19115:2003(E)

Metadata author
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

polardatacentre@bas.ac.uk

Point of contact
 
 

Overviews

Spatial extent

thumbnail

Keywords

Southern elephant seal penguin remote sensing unoccupied aerial vehicle wandering albatross
GEMET - INSPIRE themes, version 1.0

Oceanographic geographical features
Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE > Oceans > Marine Biology > Marine Birds EARTH SCIENCE > Oceans > Marine Environment Monitoring


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