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Sorption simulation data of veterinary antibiotic interactions with kaolinite surfaces

These data comprise input and output files from first principles molecular dynamics calculations on the soil mineral kaolinite, detailing its interactions with four different veterinary antibiotics, namely enrofloxacin, florfenicol, ciprofloxacin and florfenicol amine. The dataset includes the final, complete molecular dynamics trajectories of the sorption process of each antibiotic on the mineral surfaces (Al-terminated or Si-terminated). The data were collected as part of the NERC Exploring the Frontiers grant (Grant No. NE/X009572/1), ‘Antibiotic chemistry in agricultural soils: modelling mineral-antibiotic interactions from first principles’. The work fits within the broad field of ‘emerging contaminants’ in the environment, and understanding drivers of antimicrobial resistance (AMR). Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b

Simple

Date (Publication)
2024-06-19
Citation identifier
https://catalogue.ceh.ac.uk/id/ce86e353-5068-48a6-99bc-4898201d6e6b
Citation identifier
doi: / 10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b
Other citation details

Wang, Y., Carter, L., Smith, J., Chappell, H.F. (2024). Sorption simulation data of veterinary antibiotic interactions with kaolinite surfaces. NERC EDS Environmental Information Data Centre 10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b

Point of contact
Organisation name Individual name Electronic mail address Role
University of Leeds Chappell, H.F.

H.F.Chappell@leeds.ac.uk

Point of contact
University of Leeds

Wang, Y.

wangyunqing46@163.com

Author
University of Leeds Carter, L.

L.J.Carter@leeds.ac.uk

Author
University of Leeds Smith, J.

J.Smith252@leeds.ac.uk

Author
University of Leeds Chappell, H.F.

H.F.Chappell@leeds.ac.uk

Author
NERC EDS Environmental Information Data Centre

info@eidc.ac.uk

Custodian
NERC EDS Environmental Information Data Centre

info@eidc.ac.uk

Publisher
University of Leeds

EMAIL NOT PROVIDED

Owner

GEMET - INSPIRE themes, version 1.0

  • Agricultural and Aquaculture Facilities

GEMET - Concepts, version 4.1.3

  • veterinary medicine
Keywords
  • Environmental risk
  • emerging contaminants

  • sorption chemistry

  • kaolinite

  • veterinary antibiotics

Access constraints
Other restrictions
Other constraints
no limitations
Use constraints
Other restrictions
Other constraints
This resource is available under the terms of the Open Government Licence
Use constraints
Other restrictions
Other constraints

If you reuse this data, you should cite: Wang, Y., Carter, L., Smith, J., Chappell, H.F. (2024). Sorption simulation data of veterinary antibiotic interactions with kaolinite surfaces. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/ce86e353-5068-48a6-99bc-4898201d6e6b

Language
English
Character set
UTF8
Topic category
  • Farming
  • Environment
Distribution format
Name Version

castep

cell

param

cif

markdown

Distributor contact
Organisation name Individual name Electronic mail address Role

NERC EDS Environmental Information Data Centre

info@eidc.ac.uk

Distributor
OnLine resource
Protocol Linkage Name
https://catalogue.ceh.ac.uk/datastore/eidchub/ce86e353-5068-48a6-99bc-4898201d6e6b

Download the data

OnLine resource
Protocol Linkage Name
https://data-package.ceh.ac.uk/sd/ce86e353-5068-48a6-99bc-4898201d6e6b.zip

Supporting information

Hierarchy level
Non geographic dataset
Other

nonGeographicDataset

Conformance result

Title

Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services

Date (Publication)
2010-12-08
Statement

The data were collected on the high-performance computers at Leeds University (ARC4) and the national facility ARCHER2. The data were collected throughout 2023. The data were collected as part of a NERC Exploring the Frontiers Grant Awarded in November 2022.

Metadata

File identifier
ce86e353-5068-48a6-99bc-4898201d6e6b XML
Metadata language
English
Character set
8859 Part 1
Hierarchy level
Non geographic dataset
Hierarchy level name

nonGeographicDataset

Date stamp
2025-11-21T09:30:40
Metadata standard name
UK GEMINI
Metadata standard version

2.3

Metadata author
Organisation name Individual name Electronic mail address Role
NERC EDS Environmental Information Data Centre

info@eidc.ac.uk

Point of contact
 
 

Overviews

Keywords

GEMET - INSPIRE themes, version 1.0

Agricultural and Aquaculture Facilities


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