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CTD fluorescence and faecal pellet data from the Ecosystems Western Core Box and Moorings cruise to the Scotia Sea, Southern Ocean (JR304)

Zooplankton faecal pellet abundance, volume and flux were determined from samples collected at three stations in the Scotia Sea, Southern Ocean during cruise JR304. Samples were collected at six depths within the 0 - 400 m epi- to upper mesopelagic using Niskin bottles attached to a CTD unit and were preserved in a formalin-based solution. Fluorescence data were collected during the same deployments. Sampling was performed by C. Liszka and G. Tarling on board RRS James Clark Ross. Sample analysis was performed by C. Liszka at British Antarctic Survey in Cambridge.

Simple

Date (Creation)
2018-11-28
Date (Revision)
2018-11-28
Date (Publication)
2018-11-28
Date (released)
2018-11-28
Edition

1.0

Unique resource identifier
https://doi.org/10.5285/e2921d09-975c-4236-8acf-039d7462762e
Codespace

doi

Unique resource identifier
GB/NERC/BAS/PDC/01119
Codespace

https://data.bas.ac.uk/

Other citation details

Please cite this item as: Liszka, C. (2019). CTD fluorescence and faecal pellet data from the Ecosystems Western Core Box and Moorings cruise to the Scotia Sea, Southern Ocean (JR304) (Version 1.0) [Data set]. UK Polar Data Centre, British Antarctic Survey, Natural Environment Research Council, UK Research & Innovation. https://doi.org/10.5285/e2921d09-975c-4236-8acf-039d7462762e

Credit

No credit.

Status
Completed
Point of contact
Organisation name Individual name Electronic mail address Role
British Antarctic Survey, Natural Environment Research Council, UK Research & Innovation Liszka, Cecilia Author
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Point of contact
Maintenance and update frequency
As needed
Maintenance note
Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Microbiota
  • EARTH SCIENCE > Oceans > Ocean Chemistry > Carbon
  • EARTH SCIENCE > Oceans > Ocean Chemistry > Chlorophyll
  • EARTH SCIENCE > Oceans > Marine Environment Monitoring
Theme
  • Faecal pellets

  • Scotia Sea

  • carbon

  • chlorophyll

  • mesozooplankton

Place
  • Scotia Sea Southern Ocean

GEMET - INSPIRE themes, version 1.0

  • Oceanographic geographical features
Access constraints
Other restrictions
Other constraints
no limitations to public access
Access constraints
Other restrictions
Other constraints
no limitations
Use constraints
License
Other constraints
Open Government Licence v3.0
Use constraints
Other restrictions
Other constraints

Data are released under Open Government Licence V3.0:

Use constraints
Other restrictions
Other constraints

No restrictions apply.

Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Spatial representation type
Text, table
Language
English
Character set
UTF8
Topic category
  • Biota
  • Environment
  • Oceans
N
S
E
W
thumbnail




Begin date
2014-11-15
End date
2014-12-17
Supplemental Information

It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.

Title

European Petroleum Survey Group (EPSG) Geodetic Parameter Registry

Date (Publication)
2008-11-12
Cited responsible party
Organisation name Individual name Electronic mail address Role

European Petroleum Survey Group

EPSGadministrator@iogp.org

Publisher
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version

6.18.3

Distributor

Distributor contact
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Distributor
Distributor format
Name Version
application/vnd.ms-excel
Units of distribution

bytes

Transfer size
61440
OnLine resource
Protocol Linkage Name

WWW:LINK-1.0-http--link

https://ramadda.data.bas.ac.uk/repository/entry/show/?entryid=e2921d09-975c-4236-8acf-039d7462762e

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Hierarchy level
Dataset
Statement

Methodology:

An SBE9Plus CTD was used to collect fluorescence data from three stations in the Scotia Sea, which was converted from volts into chl-a (µg l-1) using the manufacturer's calibration. Chl-a concentrations were used as a proxy for the relative primary productivity of each station. 12 litre Niskin bottles attached to a SBE11Plus deck unit collected water for faecal pellet (FP) analysis at the same stations. Six bottles were fired, at 5 m, 20 m, 40 m, 100 m, 200 m and 400 m. On deck, water was gently siphoned out of the Niskin bottles via a piece of silicone tubing, which had been pre-rinsed three times with 0.22 µm filtered seawater (FSW), into pre-rinsed 20 L carboys. To ensure collection of all possible faecal material from the funnelled base of the Niskin bottles, the base of each bottle was opened, rinsed with FSW, and the water collected in separate sterile 250 ml Nalgene bottles. The contents of the carboys and Nalgene bottles were then gently filtered through a 53 µm mesh and bottles rinsed through with FSW. The contents of the mesh were backwashed into a 250 ml sterile Nalgene bottle using a 5% borax-buffered formalin-seawater solution. For sample analysis, the contents of Nalgene bottles were filtered onto a 53 µm mesh, gently rinsed and backwashed into petri dishes. Petri dishes were examined under a light microscope (Olympus SZX16 with SDF PLAPO 0.5XPF and 1.6XPF objectives) for whole or fragmented faecal pellets and other organic matter (e.g. diatoms, protozoa and marine snow). FPs were photographed using a Canon EOS 70D camera. FPs were categorised into morphological type and the length (L) and width (W) were measured with imaging software, Image J (Rasband, 1997-2016). FP abundance (m-3) was calculated by dividing abundance per sample by the volume of the Niskin sampling bottle (12 L) and multiplying by 1000. The same calculation was used to calculate the volume and carbon of FPs (m-3).

Data quality:

To support identification, some items that were difficult to classify using the light microscope alone were extracted and analysed using scanning electron microscopy.

Metadata

File identifier
e2921d09-975c-4236-8acf-039d7462762e XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Hierarchy level name

dataset

Date stamp
2018-11-28
Metadata standard name

ISO 19115 Geographic Information - Metadata

Metadata standard version

ISO 19115:2003(E)

Metadata author
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

polardatacentre@bas.ac.uk

Point of contact
 
 

Overviews

Spatial extent

thumbnail

Keywords

Faecal pellets Scotia Sea carbon chlorophyll mesozooplankton
GEMET - INSPIRE themes, version 1.0

Oceanographic geographical features
Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE > Oceans > Marine Biology > Marine Microbiota EARTH SCIENCE > Oceans > Marine Environment Monitoring EARTH SCIENCE > Oceans > Ocean Chemistry > Carbon EARTH SCIENCE > Oceans > Ocean Chemistry > Chlorophyll


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