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Benthic, epibenthic and pelagic marine invertebrate specimens collected during PS136 in the Arctic Fram Strait in 2023 and their individual lipid profiles and bulk isotopes

During the expedition PS136 LTER HAUSGARTEN in 2023 105 samples of macrobenthic marine invertebrates and 3 samples of calanoid copepods were collected by epibenthic sledge and 28 samples of calanoid copepods were collected by Bongo and Multinet and subsequently frozen at -80 degrees Celsius for lipid and bulk stable isotope analyses. Katrin Linse, Saskia Brix, Jannifer Freer and Lydia Anastasia Schmidt collected, photographed and fixed the specimens on board. The macrobenthic invertebrates and calanoid copepods were collected to study elements of the biological lipid pump in the Arctic Ocean.



The preparation and lab analyses of the lipid biomarker and stable isotope data were carried out by Rachel Jeffreys and Sabena Jane Blackbird at the University of Liverpool using Gas chromatography-mass spectrometry and an ECS8020 elemental analyser (NC Technologies) coupled to a Delta V isotope ratio mass spectrometer.



Statistical analyses and interpretation of lipid biomarker and stable isotope data were carried out by Dewi Ford, Dan Mayor and Anna K. Wadsworth at the University of Exeter.



The raw data files include lipid biomarker and stable isotope data for all analysed macrobenthic invertebrates and calanoid copepods, while the processed data files include all calanoid copepod data but selected macrobenthic taxa only, being Amphipoda, Decapoda, Isopoda, Mysidacea, Holothuroidea, Ophiuroidea, and Chaetognatha.





The contributions of KL, JF and DJM were supported by the BIOPOLE National Capability Multicentre Round 2 funding from the Natural Environment Research Council (grant no. NE/W004933/1). DJM also received funding from OceanICU (EU Grant agreement ID: 101083922; UKRI grant reference: 10063673). SB received support via the Leibniz foundation and the ALONGate project (A Long-term Observatory of the North Atlantic Gateway to the Arctic Ocean) via grant number PS150/2023 in the program for women professors.



The field work for PS136 was supported by grant no. AWI_PS136_01.

Simple

Date (Creation)
2025-10-08
Date (Revision)
2025-10-08
Date (Publication)
2025-10-08
Date (released)
2025-10-08
Edition

1.0

Unique resource identifier
https://doi.org/10.5285/e115d087-e3e4-4794-b4e0-18262b8e6400
Codespace

doi

Unique resource identifier
GB/NERC/BAS/PDC/02090
Codespace

https://data.bas.ac.uk/

Unique resource identifier
NE/W004933/1
Codespace

award

Other citation details

Please cite this item as: Linse, K., Ford, D., Blackbird, S.J., Brix, S., Freer, J.J., Jeffreys, R., Schmidt, L.A., & Mayor, D.J. (2025). Benthic, epibenthic and pelagic marine invertebrate specimens collected during PS136 in the Arctic Fram Strait in 2023 and their individual lipid profiles and bulk isotopes (Version 1.0) [Data set]. NERC EDS UK Polar Data Centre. https://doi.org/10.5285/e115d087-e3e4-4794-b4e0-18262b8e6400

Credit

No credit.

Status
Completed
Point of contact
Organisation name Individual name Electronic mail address Role
British Antarctic Survey Linse, Katrin Author
University of Exeter Ford, Dewi Author
University of Liverpool Blackbird, Sabena J. Author
Senckenberg am Meer Brix, Saskia Author
British Antarctic Survey Freer, Jennifer J. Author
University of Liverpool Jeffreys, Rachel Author
University of Rostock Schmidt, Lydia A. Author
University of Exeter Mayor, Daniel J. Author
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Point of contact
Maintenance and update frequency
As needed
Maintenance note
Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates
  • EARTH SCIENCE > Oceans > Ocean Chemistry > Hydrocarbons
  • EARTH SCIENCE > Oceans > Ocean Chemistry > Stable Isotopes
  • EARTH SCIENCE > Oceans > Marine Environment Monitoring
Theme
  • δ15N signatures

  • Calanus

  • Macrobenthos

  • benthopelagic coupling

  • fatty acid and alcohol biomarkers

Place
  • Greenland Sea - Fram Strait - Molloy Deep Arctic

GEMET - INSPIRE themes, version 1.0

  • Oceanographic geographical features
Access constraints
Other restrictions
Other constraints
public access limited according to Article 13(1)(e) of the INSPIRE Directive
Use constraints
License
Other constraints
Open Government Licence v3.0
Use constraints
Other restrictions
Other constraints

Dara are supplied under Open Government Licence v.3

Use constraints
Other restrictions
Other constraints

Data are embargoed until publication of Dewi et al. (submitted June 2025) or made freely available after 2 years (2027).

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url
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url

Association Type
Cross reference
Unique resource identifier
url
Codespace

url

Association Type
Cross reference
Unique resource identifier
doi
Codespace

doi

Association Type
Cross reference
Spatial representation type
Text, table
Language
English
Character set
UTF8
Topic category
  • Biota
  • Environment
  • Oceans
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S
E
W
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Begin date
2023-05-29
End date
2023-06-11
Supplemental Information

It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.

Title

European Petroleum Survey Group (EPSG) Geodetic Parameter Registry

Date (Publication)
2008-11-12
Cited responsible party
Organisation name Individual name Electronic mail address Role

European Petroleum Survey Group

EPSGadministrator@iogp.org

Publisher
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version

6.18.3

Distributor

Distributor contact
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

PDCServiceDesk@bas.ac.uk

Distributor
Distributor format
Name Version
text/csv
Units of distribution

bytes

Transfer size
679936
OnLine resource
Protocol Linkage Name

WWW:LINK-1.0-http--link

http://ramadda.data.bas.ac.uk/repository/entry/show?entryid=e115d087-e3e4-4794-b4e0-18262b8e6400

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Statement

Methodology:

The marine invertebrates were collected during the RV Polarstern expedition PS136.



The pelagic copepods Calanus finmarchicus and Calanus hyperboreus were collected using a BONGO net and a Multi-net.



Benthic and epibenthic marine invertebrates were collected using an epibenthic sledge.



Specimens for lipid and bulks stable isotope analyses were sorted live, photographed and fixed -80 °C in cryovials.



Lipid extractions and Gas chromatography-mass spectrometry (GC-MS) analyses were carried out in the Jeffreys' lab at the University of Liverpool following their standard protocol. Compounds were identified either by comparison of their mass spectra and relative retention indices with those available in the literature, and/or by comparison with authentic standards. Shorthand notations of fatty acids and alcohols follows the IUPAC (International Union of Pure and Applied Chemistry, hhtp://www.iupac.org) systematic nomenclature 'n-x' notation.



Quantitative data were calculated by comparison of peak areas of the internal standard with those of the compounds of interest, using the total ion current (TIC) chromatogram. The relative response factors of the analytes were determined individually for 36 representative fatty acids and sterols using authentic standards. Response factors for analytes where standards were unavailable were assumed to be identical to those of available compounds of the same class.



Bulk stable isotope analyses were carried out in the Jeffreys' lab at the University of Liverpool following their standard protocol. Isotope values were corrected using internationally certified isotopic reference materials USGS40 and USGS41a (Reston Stable Isotope Laboratory) and are reported in delta-notation (per mille) relative to atmospheric nitrogen (N2) and Vienna PeeDee Belemnite carbonate (V-PDB) scales. An internal standard of homogenized prawn (Penaeus vannamei) with well characterized d15N values (6.50 per mille +/- 0.16 per mille) was used to measure precision.



In the data analyses Quantitative lipid constituent data were separated into three datasets which included lipid compound groups (e.g., saturated fatty acids, monounsaturated fatty acids), individual fatty acids, and individual fatty alcohols. These data were converted to relative abundance (mol%) of total identified lipid compounds, fatty acids, or fatty alcohols, respectively. The relative abundance of fatty acid isomers with the same number of carbon molecules and double bounds but unidentified omega groups were summed and labelled as 'X1:X2(iso)'.

Data collection:

The epibenthic sledge used for the collection of the benthic invertebrates was DZMB Senckenberg Wilhelmshaven build following the design by Brenke (2005).



Gas chromatography-mass spectrometry (GC-MS) analyses of the total lipid extracts were conducted using a GC Trace 1300 fitted with a split-splitless injector and column DB-5MS. The eluent from the GC was transferred directly via a transfer line (320 degrees Celsius) to the electron impact source of a Thermoquest ISQMS single quadrupole mass spectrometer. Mass data were collected at a resolution of 600, cycling every second from 50 to 600 Da and were processed using Xcalibur software.



Bulk stable isotope samples were analysed following acid vapour treatment (HCL; 12 h; Yamamuro and Kayanne, 1995), using an ECS8020 elemental analyser (NC Technologies) coupled to a Delta V isotope ratio mass spectrometer (Thermo Scientific).

Data quality:

The identification to species in the calanoid copepods were carried out by experienced zooplankton scientists, while the macrobenthic invertebrates were consistently identified to higher taxonomic levels (Phylum, class, order) but only selected specimens identified to Genus or species.



Lipid and bulk stable isotope data were quality controlled using standards.

Metadata

File identifier
e115d087-e3e4-4794-b4e0-18262b8e6400 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Hierarchy level name

dataset

Date stamp
2025-10-08
Metadata standard name

ISO 19115 Geographic Information - Metadata

Metadata standard version

ISO 19115:2003(E)

Metadata author
Organisation name Individual name Electronic mail address Role
NERC EDS UK Polar Data Centre

polardatacentre@bas.ac.uk

Point of contact
 
 

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Keywords

δ15N signatures Calanus Macrobenthos benthopelagic coupling fatty acid and alcohol biomarkers
GEMET - INSPIRE themes, version 1.0

Oceanographic geographical features
Global Change Master Directory (GCMD) Science Keywords

EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates EARTH SCIENCE > Oceans > Marine Environment Monitoring EARTH SCIENCE > Oceans > Ocean Chemistry > Hydrocarbons EARTH SCIENCE > Oceans > Ocean Chemistry > Stable Isotopes


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