BGS Hosted Metadata
Antibiotic resistant gene abundance in fresh cattle faeces from the North Wyke Farm Platform
The data consists of the abundance of antibiotic resistant genes (ARG) in fresh cattle faeces from faecal samples taken from a cohort of 30 cattle. The cattle were from the North Wyke Farm Platform, a UK national capability, located at Rothamsted Research, North Wyke in Devon. Faecal samples were collected in November 2016. The cohort of 30 cattle were selected from 90 animals, ten from each of the three farmlets. Samples were collected from cattle as they entered housing for the winter, i.e. at weaning. Full details about this dataset can be found at https://doi.org/10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce
Simple
- Date (Publication)
- 2020-05-18
- Citation identifier
- https://catalogue.ceh.ac.uk/id/efcef5e3-09f2-4a23-ad19-53295a3171ce
- Citation identifier
- doi: / 10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce
- Other citation details
-
Hodgson, C.J. (2020). Antibiotic resistant gene abundance in fresh cattle faeces from the North Wyke Farm Platform. NERC Environmental Information Data Centre 10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce
- Point of contact
-
Organisation name Individual name Electronic mail address Role Rothamsted Research North Wyke Hodgson, C.J. Author Rothamsted Research North Wyke
Hodgson, C.
Point of contact NERC EDS Environmental Information Data Centre Custodian NERC Environmental Information Data Centre Publisher Rothamsted Research
Owner
-
GEMET - INSPIRE themes, version 1.0
-
-
Environmental Monitoring Facilities
-
- Access constraints
- Other restrictions
- Other constraints
- no limitations
- Use constraints
- Other restrictions
- Other constraints
-
© Natural Environment Research Council
- Use constraints
- Other restrictions
- Use constraints
- Other restrictions
- Other constraints
-
If you reuse this data, you should cite: Hodgson, C.J. (2020). Antibiotic resistant gene abundance in fresh cattle faeces from the North Wyke Farm Platform. NERC Environmental Information Data Centre https://doi.org/10.5285/efcef5e3-09f2-4a23-ad19-53295a3171ce
- Spatial representation type
- Text, table
- Distance
- 5 urn:ogc:def:uom:EPSG::9001
- Language
- English
- Character set
- UTF8
- Topic category
-
- Biota
- Environment
- Begin date
- 2016-11-01
- End date
- 2016-11-30
))
- Unique resource identifier
- OSGB 1936 / British National Grid
- Distribution format
-
Name Version Comma-separated values (CSV)
- Distributor contact
-
Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre
Distributor
- OnLine resource
-
Protocol Linkage Name https://data-package.ceh.ac.uk/data/efcef5e3-09f2-4a23-ad19-53295a3171ce Download the data
- OnLine resource
-
Protocol Linkage Name https://data-package.ceh.ac.uk/sd/efcef5e3-09f2-4a23-ad19-53295a3171ce.zip Supporting information
- Hierarchy level
- Dataset
- Other
-
dataset
Conformance result
- Title
-
Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services
- Date (Publication)
- 2010-12-08
- Statement
-
Faecal samples were taken by members of staff from Rothamsted Research North Wyke. In the laboratory faecal samples were pooled, such that for each farmlet (10 cattle) there were 3 samples, (3, 3, 4 cattle). This resulted in 9 faecal samples from which DNA was extracted using a commercially available extraction kit (MO BIO PowerSoil® DNA Isolation kit (catalogue No. 12888-100). The following adaption to the Power Soil protocol; at sample preparation samples were heated to 65 °C for 10 minutes prior to vortex. DNA was sequenced by the sequencing unit at the University of Exeter. The resulting metagenomic data was analysed at the Environmental Biotechnology Laboratory at the University of Hong Kong. The establishment licence under which the experiment was conducted was XA11784A2 and the project licence was P592D2677. Data was collected for the NERC funded “Does the potential for AMR selection differ between common UK cattle grazing systems?” NE/N019792/1.
Metadata
- File identifier
- efcef5e3-09f2-4a23-ad19-53295a3171ce XML
- Metadata language
- English
- Character set
- 8859 Part 1
- Hierarchy level
- Dataset
- Hierarchy level name
-
dataset
- Date stamp
- 2025-03-21T13:23:29
- Metadata standard name
- UK GEMINI
- Metadata standard version
-
2.3
- Metadata author
-
Organisation name Individual name Electronic mail address Role NERC EDS Environmental Information Data Centre Point of contact
)))
